Experimental Biomolecular Physics Journal Club

Experimental Biomolecular Physics

Interesting Publications

The articles below have been discussed in the Experimental Biomolecular Physics Journal Club and can be downloaded from Y:\Articles\Exp.Biomol.Phys._JournalClub\ on rimfaxe (our local server) or here for local users.

PaperDisc. dateChairman
124-Color Super-resolution Imaging by Engineering DNA-PAINT Blinking Kinetics. Orsolya K. Wade, Johannes B. Woehrstein, Philipp C. Nickels, Sebastian Strauss, Florian Stehr, Johannes Stein, Florian Schueder, Maximilian T. Strauss, Mahipal Ganji, Joerg Schnitzbauer, Heinrich Grabmayr, Peng Yin, Petra Schwille, and Ralf Jungmann. Nano Lett.2019, 19, 4, 2641-2646, DOI: 10.1021/acs.nanolett.9b00508 Jun-27-2019 Per
A Fiber-Coupled Stimulated Emission Depletion Microscope for Bend-Insensitive Through-Fiber Imaging. Brendan M. Heffernan, Stephanie A. Meyer, Diego Restrepo, Mark E. Siemens, Emily A. Gibson & Juliet T. Gopinath. Scientific Reports (2019) 9:11137 https://doi.org/10.1038/s41598-019-47319-w. Oct-08-2020 Elin
A fluorogenic probe for cell surface phosphatidylserine using an intramolecular indicator displacement sensing mechanism. Vincent E Zwicker, Bruno Oliveira, Jia Hao Yeo, Stuart Fraser, Goncalo Bernardes, Elizabeth J. New, and Katrina Jolliffe. Angew. Chem. Int. Ed. 10.1002/anie.201812489. Nov-29-2018 Saptaswa
A fluorescent membrane tension probe. Adai Colom, Emmanuel Derivery, Saeideh Soleimanpour, Caterina Tomba, Marta Dal Molin, Naomi Sakai, Marcos González-Gaitán, Stefan Matile and Aurélien Roux. Nature Chemistry Vol 10 November 2018 1118-1125. Jan-17-2019 Brant
A general approach to break the concentration barrier in single-molecule imaging. Anna B Loveland, Satoshi Habuchi, Johannes C Walter & Antoine M van Oijen. Nature methods 2012. Sep-20-2012
Nov-30-2012
Evangelos
Jerker
A general method to improve fluorophores for live-cell and single-molecule microscopy. Jonathan B Grimm, Brian P English, Jiji Chen, Joel P Slaughter, Zhengjian Zhang, Andrey Revyakin, Ronak Patel, John J Macklin, Davide Normanno, Robert H Singer, Timothe Lionnet & Luke D Lavis. Nature methods Vol.12 No.3: 244-253. Apr-16-2015 Vova
A guide to super-resolution fluorescence microscopy Lothar Schermelleh, Rainer Heintzmann, and Heinrich Leonhardt. J. Cell Biol. Vol. 190 No. 2: 165-175. Jan-26-2012 Daniel
A molecular sensor to quantify the localization of proteins, DNA and nanoparticles in cells. Laura I. FitzGerald, Luigi Aurelio, Moore Chen, Daniel Yuen, Joshua J. Rennick, Bim Graham & Angus P. R. Johnston. Nature Communications (2020) 11:4482. Sep-17-2020 Brant
A nanomechanical mass sensor with yoctogram resolution. J. Chaste, A. Eichler, J. Moser, G. Ceballos, R. Rurali and A. Bachtold. Nature Nanotechnology 2012 published online: 1 April 2012, DOI: 10.1038/NNANO.2012.42, 4 pages. Apr-19-2012 Stefan
A self-operating broadband spectrometer on a droplet. P. Malara, A. Giorgini, S. Avino, V. Di Sarno, R. Aiello, P. Maddaloni, P. De Natale & G. Gagliard. Nature communications (2020) 11:2263 https://doi.org/10.1038/s41467-020-16206-8 Sep-22-2022 Alessandro
A simple empirical algorithm for optimising depletion power and resolution for dye and system specific STED imaging. Christian A. Combs , Dan L. Sackett & Jay R. Knutson. Journal of Microscopy, Vol. 274, Issue 3 2019, pp. 168-176. Jun-20-2019 Jan
A thermodynamic definition of protein domains. Lauren L. Porter and George D. Rose. PNAS doi/10.1073. Jun-14-2012 Per
A wavelength-induced frequency filtering method for fluorescent nanosensors in vivo. Volodymyr B. Koman, Naveed A. Bakh, Xiaojia Jin, Freddy T. Nguyen, Manki Son, Daichi Kozawa, Michael A. Lee, Gili Bisker, Juyao Dong and Michael S. Strano. Nature Nanotechnology Vol 17 June 2022 643-652. Jan-19-2023 Abhilash
ACRONYM: Acronym CReatiON for You and Me. B. A. Cook. https://www.cfa.harvard.edu/~gpetitpas/Links/Astroacro.html Apr-11-2019 Chinmaya
Actin filaments attachment at the plasma membrane in live cells cause the formation of ordered lipid domains. Jelena Dinic, Parham Ashrafzadeh, Ingela Parmryd. Biochimica et Biophysica Acta 1828 (2013) 1102-1111. Apr-15-2016 Stefan
Adaptive optics for fluorescence correlation spectroscopy. Charles-Edouard Leroux, Irne Wang, Jacques Derouard, and Antoine Delon. Optics Express Vol. 19, No. 27, 26839-26849. Mar-08-2012 Per
Aggregation Distributions on Cells Determined by Photobleaching Image Correlation Spectroscopy. Giuseppe D. Ciccotosto, Noga Kozer, Timothy T. Y. Chow, James W. M. Chon, and Andrew H. A. Clayton. Biophysical Journal Volume 104 March 2013 1056-1064. Mar-21-2013 Per
Aggregation and disaggregation of anionic aluminum phthalocyanines in cationic pre-micelle and micelle media: A fluorescence study.Raquel F. Correia, Suzana M. Andrade, M. Isabel Viseu. Journal of Photochemistry and Photobiology A: Chemistry 235 (2012) 21-28. Apr-26-2012 Vova
AMPK regulates NADPH homeostasis to promote tumour cell survival during energy stress. Sang-Min Jeon, Navdeep S. Chandel & Nissim Hay. Nature 2012 Vol 485 661-667. Jun-07-2012 Thiemo
Amyloidogenic Nanoplaques in Blood Serum of Patients with Alzheimer's Disease Revealed by Time-Resolved Thioflavin T Fluorescence Intensity Fluctuation Analysis. Tiiman A, Jelić V, Jarvet J, Jremo P, Bogdanović N, Rigler R, Terenius L, Grslund A, Vukojević V. Mar-24-2020 Jerker
An alternative framework for fluorescence correlation spectroscopy. Sina Jazani, Ioannis Sgouralis, Omer M. Shafraz, Marcia Levitus, Sanjeevi Sivasankar & Steve Press. Nature Communications (2019) 10:3662. Nov-14-2019 Brant
An alternative way to use the triplet energy of fluorescent dyes in organic light-emitting devices via an external iodide. Xing Xing, Taiju Tsuboi, Yosuke Nakai, Fei Wang, Boyuan Qi, Zhijian Chen, Bo Qu, Lixin Xiao, Qihuang Gong. Organic Electronics 13 (2012) 195-198. Feb-22-2012 Thiemo
An FCS Study of Unfolding and Refolding of CPM-Labeled Human Serum Albumin: Role of Ionic Liquid. Dibyendu Kumar Sasmal, Tridib Mondal, Supratik Sen Mojumdar, Aparajita Choudhury, Rajat Banerjee, and Kankan Bhattacharyya. J. Phys. Chem. B 2011, 115, 13075-13083. Feb-22-2012 Thiemo
An ultra wideband-high spatial resolution-compact electric field sensor based on Lab-on-Fiber technology. V. Calero, M.-A. Suarez, R. Salut, F. Baida, A. Caspar, F. Behague, N. Courjal, L Galtier, L. Gillette, L. Duvillaret, G. Gaborit & M.-P. Bernal. SciRep (2019) 9:8058 https://doi.org/10.1038/s41598-019-446-y Oct-15-2020 Halvor
Analyses of Intravesicular Exosomal Proteins Using a Nano-Plasmonic System. Jongmin Park, Hyungsoon Im, Seonki Hong, Cesar M. Castro, Ralph Weissleder, and Hakho Lee. ACS Photonics 2018, 5, 487-494. May-31-2018 Katia
Analysis of sparse molecular distributions in fibrous arrangements based on the distance to the first neighbor in single molecule localization microscopy. Alan M. Szalai, Luca F. Lopez, a Miguel ngel Morales-Vsquez, Fernando D. Stefani and Pedro F. Aramenda. Nanoscale, 2020, 12, 9495-9506. Jun-25-2020 Jerker
Anomalous subdiffusive measurements by fluorescence correlations spectroscopy and simulations of translational diffusive behavior in live cells. Gerd Baumann, Masataka Kinjo, and Zeno Fldes-Papp. Journal of Biological Methods 2014, Vol. 1, 1-9., DOI: 10.14440/jbm.2014.17. Apr-30-2015 Per
Annular Protofibrils Are a Structurally and Functionally Distinct Type of Amyloid Oligomer. Rakez Kayed, Anna Pensalfini, Larry Margol, Yuri Sokolov, Floyd Sarsoz, Elizabeth Head, James Hall, and Charles Glabe. The Journal of Biological Chemistry 2009 VOL. 284, no. 7, pp. 4230-4237. Apr-19-2012 Stefan
Analyzing the Homeostasis of Signaling Proteins by a Combination of Western Blot and Fluorescence Correlation Spectroscopy. Yi-Da Chung, Michael D. Sinzinger, Petra Bovee-Geurts, Marina Krause, Sip Dinkla, Irma Joosten, Werner J. Koopman, Merel J. W. Adjobo-Hermans, and Roland Brock. Biophysical Journal Volume 101 December 2011: 2807-2815 Jan-12-2012 Vova
Aptamers as potential tools for super-resolution microscopy. Felipe Opazo, Matthew Levy, Michelle Byrom, Christina Schfer, Claudia Geisler, Teja W Groemer, Andrew D Ellington & Silvio O Rizzoli. nature methods Vol.9 No.10 October 2012:938-939. Oct-25-2012 Jerker
Artifact-Free and Detection-Profile-Independent Higher-Order Fluorescence Correlation Spectroscopy for Microsecond-Resolved Kinetics. 1. Multidetector and Sub-Binning Approach. Farshad Abdollah-Nia, Martin P. Gelfand, and Alan Van Orden. J. Phys. Chem. B 2017, 121, 2373-2387. May-05-2017 Stefan
Artifact-Free and Detection-Profile-Independent Higher-Order Fluorescence Correlation Spectroscopy for Microsecond-Resolved Kinetics. 2. Multidetector and Sub-Binning Approach. Farshad Abdollah-Nia, Martin P. Gelfand, and Alan Van Orden. J. Phys. Chem. B 2017, 121, 2388-2399. May-05-2017 Stefan
ATP-induced helicase slippage reveals highly coordinated subunits. Bo Sun, Daniel S. Johnson, Gayatri Patel, Benjamin Y. Smith, Manjula Pandey, Smita S. Patel & Michelle D. Wang. Nature Vol 478 2011: 132-136. Dec-08-2011 Stefan
Atto Thio 12 as a promising dye for photo-CIDNP. Alexander Sobol, Felix Torres, Anatol Aicher, Alois Renn, and Roland Rieka. J. Chem. Phys. 151, 234201 (2019); doi: 10.1063/1.5128575. Jan-09-2020 Jerker
Background-free imaging of chemical bonds by a simple and robust frequency-modulated stimulated Raman scattering microscopy. Hanqing Xiong, Naixin Qian, Zhilun Zhao, Lingyan Shi, Yupeng Miao, and Wei Min. Optics Express 15663 Vol. 28, No. 10, 11 May 2020. Jun-03-2021 Haichun
Background suppression in fluorescence nanoscopy with stimulated emission double depletion. Peng Gao, Benedikt Prunsche, Lu Zhou, Karin Nienhaus and G. Ulrich Nienhaus. Nature Photonics VOL 11 March 2017, p: 163-170. Mar-31-2017 Elin
Bayesian localization microscopy reveals nanoscale podosome dynamics. Susan Cox, Edward Rosten, James Monypenny, Tijana Jovanovic-Talisman, Dylan T Burnette, Jennifer Lippincott-Schwartz, Gareth E Jones1 & Rainer Heintzmann. Nature methods Vol.9 no.2 February 2012: 195-200. Feb-09-2012 Jerker
Biological mechanisms, one molecule at a time Ignacio Tinoco, Jr and Ruben L. Gonzalez, Jr. Genes Dev. 2011 25: 1205-1231 Jan-19-2012 Jonas
Biological measurement beyond the quantum limit. Michael A. Taylor, Jiri Janousek, Vincent Daria, Joachim Knittel, Boris Hage, Hans-A. Bachor. Nature Photonics Vol 7 March 2013, 229-233. DOI: 10.1038/NPHOTON.2012.346 Jan-30-2020 Niklas
Biological Imaging with Medium-Sensitive Bichromatic Flexible Fluorescent Dyes. Yang Cao, Xiaozhu Wang, Xiaolei Shi, Susanne M. Clee, Patrick L. McGeer, Michael O. Wolf, and Chris Orvig. Angew. Chem. Int. Ed. 2017, 56, 15603-15606 Dec-01-2017 Saptaswa
Biomechanics and biophysics of cancer cells. Subra Suresh. Acta Biomater. 2007 July ; 3(4): 413-438. Jan-26-2012 Daniel
Broken detailed balance at mesoscopic scales in active biological systems. Christopher Battle, Chase P. Broedersz, Nikta Fakhri, Veikko F. Geyer, Jonathon Howard, Christoph F. Schmidt, Fred C. MacKintosh. Science 29 April 2016, Vol 352 Issue 6285, 604-607. May-20-2016 Lei
Cadmium-Free Quantum Dots as Fluorescent Labels for Exosomes. Garima Dobhal, Deanna Ayupova, Geoffry Laufersky, Zeineb Ayed, Thomas Nann and Renee V. Goreham. Sensors 2018, 18, 3308; doi:10.3390/s18103308. Nov-29-2018 Saptaswa
Cell membrane modulation as adjuvant in cancer therapy. Sara Zalba, Timo L.M. ten Hagen. Cancer Treatment Reviews 52 (2017), 48-57. Apr-21-2017 Saptaswa
Cell-sized asymmetric lipid vesicles facilitate the investigation of asymmetric membranes. Koki Kamiya, Ryuji Kawano, Toshihisa Osaki, Kazunari Akiyoshi and Shoji Takeuchi. Nature Chemistry Vol 8 September 201, 881-890. Apr-21-2017 Saptaswa
Cell-surface sensors for real-time probing of cellular environments. Weian Zhao1, Sebastian Schafer1, Jonghoon Choi, Yvonne J. Yamanaka, Maria L. Lombardi, Suman Bose, Alicia L. Carlson, Joseph A. Phillips, Weisuong Teo, Ilia A. Droujinine, Cheryl H. Cui1, Rakesh K. Jain, Jan Lammerding, J. Christopher Love, Charles P. Lin, Debanjan Sarkar, Rohit Karnik and Jeffrey M. Karp. Nature nanotechnology vol 6 August 2011, 524-531. Mar-22-2012 Yang
Central dogma at the single-molecule level in living cells. Gene-Wei Li & X. Sunney Xie. Nature Vol. 475 2011: 308-315. Dec-01-2011
Dec-08-2011
Evangelos
Stefan
Challenges in long-term imaging and quantification of single-cell dynamics. Stavroula Skylaki, Oliver Hilsenbeck & Timm Schroeder. Nature biotechnology, volume 34 number 11 2016: 1137-1144. Nov-11-2016 Joachim
Characterization of Dark Quencher Chromophores as Nonfluorescent Acceptors for Single-Molecule FRET. Ludovic Le Reste, Johannes Hohlbein, Kristofer Gryte, and Achillefs N. Kapanidis. Biophysical Journal Volume 102 May 2012 2658-2668. Jun-07-2012 Thiemo
Characterization of the Triplet State of Hybridization-Sensitive DNA Probe by Using Fluorescence Correlation Spectroscopy. Hyo-Sup Shin, Akimitsu Okamoto, Yasushi Sako, Sok Won Kim, Soo Yong Kim, and Chan-Gi Pack. J. Phys. Chem. A 2013, 117, 27-33. Feb-14-2013 Jerker
Chemical Photocatalysis with Rhodamine 6G: Investigation of Photoreduction by Simultaneous Fluorescence Correlation Spectroscopy and Fluorescence Lifetime Measurements. Josef M. Haimerl, Indrajit Ghosh, Burkhard Konig, John M. Lupton, and Jan Vogelsang. J. Phys. Chem. B XXXX, XXX, XXX-XXX. Nov-29-2018 Saptaswa
Chip-based wide field-of-view nanoscopy. Robin Diekmann, Øystein I. Helle, Cristina I. Øie, Peter McCourt, Thomas R. Huser, Mark Schüttpelz & Balpreet S. Ahluwalia. Nature Photonics volume 11, pages 322-328 (2017). Nov-19-2020 Katia
Circular scanning fluorescence correlation spectroscopy on membranes. Zdenek Petrasek, Susan Derenko and Petra Schwille. Optics express December 2011 Vol. 19, No. 25: 25006-21. Jan-19-2012 Jonas
Circularly polarised luminescence laser scanning confocal microscopy to study live cell chiral molecular interactions. Patrycja Stachelek, Lewis MacKenzie, David Parker & Robert Pal. Nature communications (2022) 13:553 https://doi.org/10.1038/s41467-022-28220-z. Apr-14-2022 Niusha
Clinical Measurement of von Willebrand Factor by Fluorescence Correlation Spectroscopy. Richard Torres, Jonathan R. Genzen, and Michael J. Levene1. Clinical Chemistry 58:6 1010-1018 (2012). Sep-20-2012 Evangelos
Combining the best of two worlds: Stimulated Raman excited fluorescence. Hanqing Xiong and Wei Min. J. Chem. Phys. 153, 210901 (2020); doi: 10.1063/5.0030204. Apr-1-2021 Jerker
Compressive three-dimensional super-resolution microscopy with speckle-saturated fluorescence excitation. M. Pascucci, S. Ganesan, A. Tripathi, O. Katz, V. Emiliani & M. Guillon. Nature communications (2019)10:1327 https://doi.org/10.1038/s41467-019-09297-5 Apr-04-2019 Joachim
Computer Prediction of pKa Values in Small Molecules and Proteins. Claudio D. Navo and Gonzalo Jiménez-Osés. ACS Med. Chem. Lett. 2021. Nov-25-2021 Per
Coherent-hybrid STED: high contrast sub- diffraction imaging using a bi-vortex depletion beam. António Pereira, Mafalda Sousa, Ana C. Almeida, Luísa T. Ferreira, Ana Rita Costa, Marco Novais-Cruz, Cristina Ferrás, Mónica Mendes Sousa, Paula Sampaio, Michael Belsley, and Helder Maiato. Optics Express Vol. 27, No. 6, 18 Mar 2019, 8092-8111. Jun-20-2019 Jan
Confocal-based fluorescence fluctuation spectroscopy with a SPAD array detector. Eli Slenders, Marco Castello, Mauro Buttafava, Federica Villa, Alberto Tosi, Luca Lanzanò, Sami Valtteri Koho and Giuseppe Vicidomini. Light: Science & Applications (2021)10:31. Feb-02-2021 Joachim
Consequences of membrane topography. Ingela Parmryd and Bjrn nfelt. FEBS Journal 280 (2013) 2775-2784. Apr-25-2014 Stefan
Controlling the fluorescence of ordinary oxazine dyes for single-molecule switching and superresolution microscopy. Jan Vogelsang, Thorben Cordes, Carsten Forthmann, Christian Steinhauer, and Philip Tinnefeld. PNAS May 19, 2009 vol. 106 no. 20 8107-8112. May-24-2012 Daniel
Corner states of light in photonic waveguides. Ashraf El Hassan, Flore K. Kunst, Alexander Moritz, Guillermo Andler, Emil J. Bergholtz and Mohamed Bourennane. Nature Photonics Vol 13 October 2019 697-700. www.nature.com/naturephotonics. Dec-17-2020 Ashraf
Correcting for Spectral Cross-Talk in Dual-Color Fluorescence Cross-Correlation Spectroscopy. Kirsten Bacia, Zdene Petrasek, and Petra Schwille. ChemPhysChem 2012, 13, 1221-1231. May-10-2012 Jonas
Correction of dichroic mirror-induced PSF distortion in STED microscopy. Yanghui Li, Hui Zhou, Xiaoyu Liu, Chengliang Xia & Le Wang. Journal of Modern Optics, 2018 VOL. 65, NO. 12, 1424-1430. May-24-2018 Niusha
Correlating Calcium Binding, Frster Resonance Energy Transfer, and Conformational Change in the Biosensor TN-XXL. Anselm Geiger, Luigi Russo, Thomas Gensch, Thomas Thestrup, Stefan Becker, Karl-Peter Hopfner, Christian Griesinger, Gregor Witte, and Oliver Griesbeck. Biophysical Journal Volume 102 May 2012 2401-2410. Jun-07-2012 Thiemo
Correlational Analysis of Proteins and Nonmetallic Nanoparticles in a Deep-Nulling Microscope. Michael Hilbert, Hendrik Hippchen, Axel Wehling, and Peter J. Walla. J. Phys. Chem. B 2005, 109, 18162-18170. Apr-19-2012 Stefan
Correlation-Matrix Analysis of Two-Color Coincidence Events in Single-Molecule Fluorescence Experiments. Idir Yahiatene, Sren Doose, Thomas Huser, and Markus Sauer. 2 American Chemical Society 2729 dx.doi.org/10.1021/ac2030283 Anal. Chem. 2012, 84, 2729-2736 May-10-2012 Jonas
Correlative nanomechanical profiling with super-resolution F-actin imaging reveals novel insights into mechanisms of cisplatin resistance in ovarian cancer cells. Shivani Sharma, Chintda Santiskulvong, Laurent A. Bentolila, JianYu Rao, Oliver Dorigo, James K. Gimzewski. Nanomedicine: Nanotechnology, Biology, and Medicine xx (2011): xxx-xxx. Jan-26-2012 Daniel
Correlative two-color two-photon (2C2P) excitation STED microscopy. Christoph Polzer, Stefan Ness, Mojtaba Mohseni, Thomas Kellerer, Markus Hilleringmann, Joachim Rädler, and Thomas Hellerer. Biomedical Optics Express Vol. 10, No. 9 /1 September 2019, p 4516. Oct-01-2020 Chinmaya
Covalent Ras Dimerization on Membrane Surfaces through Photosensitized Oxidation. Jean K. Chung, Young Kwang Lee, Hiu Yue Monatrice Lam, and Jay T. Groves. J. Am. Chem. Soc. 2016, 138, 1800-1803. Apr-07-2018 Brant
Current technologies for HER2 testing in breast cancer. C.B. Moelans, R.A. de Weger, E. Van der Wall, P.J. van Diest. Critical Reviews in Oncology/Hematology 80 (2011): 380-392. Jan-19-2012 Jonas
Creating Supported Plasma Membrane Bilayers Using Acoustic Pressure. Erdinc Sezgin, Dario Carugo, Ilya Levental, Eleanor Stride and Christian Eggeling. Membranes 2020, 10(2), 30; https://doi.org/10.3390/membranes10020030 Apr-16-2020 Chinmaya
Cyanine fluorophore derivatives with enhanced photostability. Roger B Altman, Daniel S Terry, Zhou Zhou, Qinsi Zheng, Peter Geggier, Rachel A Kolster, Yongfang Zhao, Jonathan A Javitch, J David Warren & Scott C Blanchard. Nature methods, Vol.9 No.1 January 2012, 68-73. Mar-29-2012 Evangelos
Defining the Basis of Cyanine Phototruncation Enables a New Approach to Single-Molecule Localization Microscopy. Siddharth S. Matikonda, Dominic A. Helmerich, Mara Meub, Gerti Beliu, Philip Kollmannsberger, Alexander Greer, Markus Sauer, and Martin J. Schnermann. ACS Cent. Sci. 2021, 7, 1144-1155. Sep-16-2021
Apr-7-2022
Joachim
Jerker
Detection of Cancer-Cells in Prostate Tissue with Time-Resolved Fluorescence Spectroscopy. C.E. Gerich J. Opitz, M. Toma, M. Sergon, S. Fssel, R. Nanked, J. Fehre, M. Wirth, G. Baretton and J. Schreiber. Proc. of SPIE Vol. 7897: 78970R1-12. Jan-19-2012 Jonas
Detection of long-range electrostatic interactions between charged molecules by means of fluorescence correlation spectroscopy. Ilaria Nardecchia, Mathias Lechelon, Matteo Gori, Irene Donato, Jordane Preto, Elena Floriani, Sebastien Jaeger, Sebastien Mailfert, Didier Marguet, Pierre Ferrier, and Marco Pettini. Physical Review E 96, 022403:1-13 (2017). Nov-17-2017 Jerker
Determination of equilibrium and rate constants for complex formation by fluorescence correlation spectroscopy supplemented by dynamic light scattering and Taylor dispersion analysis. Xuzhu Zhang, Andrzej Poniewierski, Aldona Jelińska, Anna Zagoźdźon, Agnieszka Wisniewska, Sen Hou and Robert Holyst. Soft Matter, 2016, 12, 8186-8194. Nov-11-2016 Joachim
Determination of Equilibrium Constant and Relative Brightness in Fluorescence Correlation Spectroscopy by Considering Third-Order Correlations. Zhenqin Wu, Huimin Bi, Sichen Pan, Lingyi Meng, and Xin Sheng Zhao. J. Phys. Chem. B 2016, 120, 11674-11682. Feb-27-2017 Stefan
Determination of the mechanism of photo-ionization of NADH in aqueous solution on laser excitation at 355 nm. Lars Lindqvist, Barbara Czochralska and Ivan Grigorov. Chemical Physics Letters 1985 Volume 119, number 6, 494-498. Jan-24-2013 Thiemo
Development of new photon-counting detectors for single-molecule fluorescence microscopy. X. Michalet, R. A. Colyer, G. Scalia, A. Ingargiola, R. Lin, J. E. Millaud, S. Weiss, Oswald H. W. Siegmund, Anton S. Tremsin, John V. Vallerga, A. Cheng, M. Levi, D. Aharoni, K. Arisaka, F. Villa, F. Guerrieri, F. Panzeri, I. Rech, A. Gulinatti, F. Zappa, M. Ghioni and S. Cova. Phil. Trans. R. Soc. B 2013 368-390, 20120035, published online 24 December 2012 Feb-14-2013 Jerker
Diffraction-unlimited all-optical imaging and writing with a photochromic GFP. Tim Grotjohann, Ilaria Testa, Marcel Leutenegger, Hannes Bock, Nicolai T. Urban, Flavie Lavoie-Cardinal, Katrin I. Willig, Christian Eggeling, Stefan Jakobs1, & Stefan W. Hell. Nature Vol 478 13 October 2011: 204-208. Jan-26-2012 Daniel
Diffraction-unlimited imaging: from pretty pictures to hard numbers. Wim Vandenberg, Marcel Leutenegger, Theo Lasser, Johan Hofkens, Peter Dedecker. Cell Tissue Res (2015) 360:151-178. Apr-30-2015 Per
Diffusion of Single-Pass Transmembrane Receptors: From the Plasma Membrane into Giant Liposomes. Remigiusz Worch, Zdenek Petrasek, Petra Schwille, Thomas Weidemann. J Membrane Biol DOI 10.1007/s00232-016-9936-8. Feb-27-2017 Stefan
Direct Detection of Radical Cations of NADH Analogues. Shunichi Fukuzumi, Osamu Inada, and Tomoyoshi Suenobu. J. Am. Chem. Soc. 2002, 124, 14538-14539. Jan-24-2013 Thiemo
Direct identification of ligand-receptor interactions on living cells and tissues. Andreas P Frei, Ock-Youm Jeon, Samuel Kilcher, Hansjoerg Moest, Lisa M Henning, Christian Jost, Andreas Plckthun, Jason Mercer, Ruedi Aebersold, Erick M Carreira & Bernd Wollscheid. nature biotechnology. Volume 30 Number 10 October 2012 997-1003. Oct-25-2012 Jerker
Direct Measurement of Association and Dissociation Rates of DNA Binding in Live Cells by Fluorescence Correlation Spectroscopy. Ariel Michelman-Ribeiro, Davide Mazza, Tilman Rosales, Timothy J. Stasevich, Hacene Boukari, Vikas Rishi, Charles Vinson, Jay R. Knutson, and James G. McNally. Biophysical Journal Volume 97 July 2009 337-346. Nov-29-2012 Stefan
Directional Fluorescence Spectral Narrowing in All-Polymer Microcavities Doped with CdSe/CdS Dot-in-Rod Nanocrystals. Giovanni Manfredi, Paola Lova, Francesco Di Stasio, Roman Krahne, and Davide Comoretto. ACS Photonics 2017, 4, 1761-1769 DOI: 10.1021/acsphotonics.7b00330 Jan-23-2020 Alessandro
Directionality of individual kinesin-5 Cin8 motors is modulated by loop 8, ionic strength and microtubule geometry. Adina Gerson-Gurwitz1, Christina Thiede, Natalia Movshovich, Vladimir Fridman, Maria Podolskaya, Tsafi Danieli, Stefan Lakamper, Dieter R Klopfenstein, Christoph F Schmidt, and Larisa Gheber. The EMBO Journal, Vol 30, No 24 2011: 4942-4954. Dec-15-2011 Sofia
DNA-Based Patterning of Tethered Membrane Patches. Laura D. Hughes and Steven G. Boxer. Langmuir 2013, 29, 12220-12227. May-20-2016 Lei
DNA flow injection through solid state nanopores. Thomas Auger. Master of Science Thesis at KTH 2013. Aug-15-2013 Jerker
DNA origami as biocompatible surface to match single-molecule and ensemble experiments. Andreas Gietl, Phil Holzmeister, Dina Grohmann and Philip Tinnefeld. Nucleic Acids Research, 2012, Vol. 40, No. 14: e110. Dec-08-2011 Stefan
Do Lipid Rafts Exist? Mitch Leslie. Science 2011 Vol. 334: 1046-7. Dec-08-2011 Stefan
Dual-Enhanced Raman Scattering-Based Characterization of StemCell Differentiation Using Graphene-Plasmonic Hybrid Nanoarray. Letao Yang, Jin-Ho Lee, Christopher Rathnam, Yannan Hou, Jeong-Woo Choi, and Ki-Bum Lee. Nano Lett.2019, 19, 8138-8148 Dec-5-2019 Maryam
Dual-modulation difference stimulated emission depletion microscopy to suppress the background signal. Wensheng Wang, Chuankang Li, Zhengyi Zhan, Zhimin Zhang, Yubing Han, Cuifang Kuang, and Xu Liu. Advanced Photonics 046001-1 Aug 2022 Vol. 4(4). Jan-19-2023 Abhilash
Dual-objective storm reveals three-dimensional filament organization in the actin cytoskeleton. Ke Xu, Hazen P Babcock & Xiaowei Zhuang. Nature methods vol.9 no.2 February 2012: 185. Feb-09-2012 Jerker
Dynamic upconversion multicolour editing enabled by molecule-assisted opto-electrochemical modulation. Yiming Wu, Jiahui Xu, Xian Qin, Jun Xu1, & Xiaogang Liu. Nature Communications (2021)12:2022. Oct-14-2012 Niusha
Early Amyloidogenic Oligomerization Studied through Fluorescence Lifetime Correlation Spectroscopy. Jose M. Paredes, Salvador Casares, Maria J. Ruedas-Rama, Elena Fernandez, Fabio Castello, Lorena Varela, and Angel Orte. Int. J. Mol. Sci. 2012, 13, 9400-9418. Nov-29-2012 Stefan
Efficient polarization splitter-rotator on thin-film lithium niobate. Xuanhao Wang, An Pan, Tingan Li, Cheng Zeng, and Jinsong Xia. Optics Express 38044. Vol. 29, No. 23 / 8 Nov 2021. Jun-23-2022 Tiangtong
Effect of pH on fluorescence quenching of organic dyes by graphene oxide. Suppachai Srisantitham, Mongkol Sukwattanasinitt, Sakulsuk Unarunotaia. Colloids and Surfaces A 550 (2018) 123-131. Jun-7-2018 Baris
Efficient Single-Molecule Fluorescence Resonance Energy Transfer Analysis by Site-Specific Dual-Labeling of Protein Using an Unnatural Amino Acid. Moon-Hyeong Seo, Tae-Sun Lee, Eunkyung Kim, Young Lag Cho, Hee-Sung Park, Tae-Young Yoon, and Hak-Sung Kim. Anal. Chem. 2011, 83: 8849-8854. Dec-15-2011 Sofia
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Fluorescent D-Amino Acids for Super-resolution Microscopy of the Bacterial Cell Wall. Chen Zhang, Luc Reymond, Ophélie Rutschmann, Mischa A. Meyer, Julien Denereaz, Jiangtao Qiao, Faustine Ryckebusch, Juliette Griffié, Willi L. Stepp, and Suliana Manley. ACS Chem. Biol. 2022, 17, 2418-2424. Dec-01-2022 Joachim
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Functional Nanoscale Organization of Signaling Molecules Downstream of the T Cell Antigen Receptor. Eilon Sherman, Valarie Barr, Suliana Manley, George Patterson, Lakshmi Balagopalan, Itoro Akpan, Carole K. Regan, Robert K. Merrill, Connie L. Sommers, Jennifer Lippincott-Schwartz, and Lawrence E. Samelson. Immunity 35, 705-720, November 23, 2011. Dec-15-2011 Sofia
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Gold-Nanorod-Enhanced Fluorescence Correlation Spectroscopy of Fluorophores with High Quantum Yield in Lipid Bilayers. Biswajit Pradhan, Saumyakanti Khatua, Ankur Gupta, Thijs Aartsma, Gerard Canters, and Michel Orrit. J. Phys. Chem. C 2016, 120, 25996-26003. Feb-27-2017 Stefan
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Heterogeneity and Turnover of Intermediates during Amyloid-beta (Abeta) Peptide Aggregation Studied by Fluorescence Correlation Spectroscopy. Ann Tiiman, Jri Jarvet, Astrid Grslund, and Vladana Vukojević. Biochemistry 2015, 54, 7203-7211. Jan-29-2016 Per
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Highly Sensitive Method for Assay of Drug-Induced Apoptosis Using Fluorescence Correlation Spectroscopy. Lingao Ruan, Zhancheng Xu, Tao Lan, Jinjie Wang, Heng Liu, Chaodong Li, Chaoqing Dong, and Jicun Ren. Anal. Chem. 2012, 84, 7350-7358. Sep-20-2012 Evangelos
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Illuminating NAD+ Metabolism in Live Cells and In Vivo Using a Genetically Encoded Fluorescent Sensor. Yejun Zou, Aoxue Wang, Li Huang, Xudong Zhu, Qingxun Hu, Yinan Zhang, Xianjun Chen, Fengwen Li, Qiaohui Wang, Hu Wang, Renmei Liu, Fangting Zuo, Ting Li, Jing Yao, Yajie Qian, Mei Shi, Xiao Yue, Weicai Chen, Zhuo Zhang, Congrong Wang, Yong Zhou, Linyong Zhu, Zhenyu Ju, Joseph Loscalzo, Yi Yang, and Yuzheng Zhao. Developmental Cell 53 2020, 240-252. Apr-30-2020 Elin
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In Vivo Multiphoton NADH Fluorescence Reveals Depth-Dependent Keratinocyte Metabolism in Human Skin. Mihaela Balu, Amaan Mazhar, Carole K. Hayakawa, Richa Mittal, Tatiana B. Krasieva, Karsten Konig, Vasan Venugopalan, and Bruce J. Tromberg. Biophysical Journal Volume 104 January 2013 258-267. Jan-24-2013 Thiemo
In Vivo Single-Molecule Detection of Nanoparticles for Multiphoton Fluorescence Correlation Spectroscopy to Quantify Cerebral BloodFlow. Xu Fu, Pradoldej Sompol, Jason A. Brandon, Christopher M. Norris, Thomas Wilkop,Lance A. Johnson, and Christopher I. Richards. NanoLett.2020, 20, 6135-6141. Sep-24-2020 Baris
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K-Ras4B Remains Monomeric on Membranes over a Wide Range of Surface Densities and Lipid Compositions. Jean K. Chung, Young Kwang Lee, John-Paul Denson, William K. Gillette, Steven Alvarez, Andrew G. Stephen, and Jay T. Groves. Biophysical Journal 114, 137-145, January 9, 2018 Aug-30-2018 Stefan
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Label-free metabolic imaging by mid-infrared optoacoustic microscopy in living cells. Miguel A. Pleitez, Asrar Ali Khan, Alice Sold, Andriy Chmyrov, Josefine Reber, Francesca Gasparin, Markus R. Seeger, Benedikt Schtz, Stephan Herzig, Marcel Scheideler and Vasilis Ntziachristos. Nature Biotechnology 2019, https://doi.org/10.1038/s41587-019-0359-9 Jan-9-2020 Jerker
Label-free quantification of the effects of lithium niobate polarization on cell adhesion via holographic microscopy. Biagio Mandracchia, Oriella Gennari, Alessia Bramanti, Simonetta Grilli, Pietro Ferraro. J. Biophotonics. 2018;11:e201700332. https://doi.org/10.1002/jbio.201700332 Apr-18-2019 Alessandro
Lanthanide-doped inorganic nanoparticles turn molecular triplet excitons bright. Sanyang Han, Renren Deng, Qifei Gu, Limeng Ni, Uyen Huynh, Jiangbin Zhang, Zhigao Yi, Baodan Zhao, Hiroyuki Tamura, Anton Pershin, Hui Xu, Zhiyuan Huang, Shahab Ahmad, Mojtaba Abdi-Jalebi, Aditya Sadhanala, Ming Lee Tang, Artem Bakulin, David Beljonne, Xiaogang Liu & Akshay Rao. Nature volume 587, pages594-599(2020). Dec-03-2020 Haichun
Layer with reduced viscosity at water-oil interfaces probed by fluorescence correlation spectroscopy. Dapeng Wang, Leonid Pevzner, Chen Li, Kalina Peneva, Christopher Y. Li, Derek Y. C. Chan, Klaus Mllen, Markus Mezger, Kaloian Koynov, and Hans-Jrgen Butt. Physical Review E 87, 012403 (2013), 12403-1-7. May-23-2013 Stefan
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Super-Resolution Imaging of C-Type Lectin and Influenza Hemagglutinin Nanodomains on Plasma Membranes Using Blink Microscopy. Michelle S. Itano, Christian Steinhauer, Jrgen J. Schmied, Carsten Forthmann, Ping Liu, Aaron K. Neumann, Nancy L. Thompson, Philip Tinnefeld, and Ken Jacobson. Biophysical Journal Volume 102 April 2012 1534,1542. May-24-2012 Daniel
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The Spectroscopic Basis of Fluorescence Triple Correlation Spectroscopy. William K. Ridgeway, David P. Millar, and James R. Williamson. J. Phys. Chem. B 2012, 116, 1908-1919. Mar-08-2012 Per
Thermally reconfigurable quantum photonic circuits at telecom wavelength by femtosecond laser micromachining. Fulvio Flamini, Lorenzo Magrini, Adil S Rab, Nicolò Spagnolo, Vincenzo D'Ambrosio, Paolo Mataloni, Fabio Sciarrino, Tommaso Zandrini, Andrea Crespi, Roberta Ramponi and Roberto Osellame. Light: Science & Applications (2015) 4, e354; doi:10.1038/lsa.2015.127 Oct-7-2021 Ashraf
Thermodynamic Measurements of Bilayer Insertion of a Single Transmembrane Helix Chaperoned by Fluorinated Surfactants. Alexander Kyrychenko, Mykola V. Rodnin, Yevgen O. Posokhov, Andrea Holt, Bernard Pucci, J. Antoinette Killian and Alexey S. Ladokhin. J. Mol. Biol. (2012) 416, 328-334. Mar-08-2012 Per
Thermophoretic Detection of Exosomal microRNAs by Nanoflares. Junxiang Zhao, Chao Liu, Yike Li, Yao Ma, Jinqi Deng, Lele Li, and Jiashu Sun. J. Am. Chem. Soc. 2020, 142, 4996-5001. Sep-17-2020 Brant
Three-Dimensional, Tomographic Super-Resolution Fluorescence Imaging of Serially Sectioned Thick Samples. Siddharth Nanguneri, Benjamin Flottmann, Heinz Horstmann, Mike Heilemann, Thomas Kuner. PLoS ONE, 1 May 2012, Volume 7, Issue 5, e38098. Jun-14-2012 Per
Three dimensional parallelized RESOLFT nanoscopy for volumetric live cell imaging. Andreas Bodn, Francesca Pennacchietti, Ilaria Testa. bioRxiv Jan 9 2020. Mar-05-2020 Per
Toward in Vivo Imaging of Heart Disease Using a Radiolabeled Single-Chain Fv Fragment Targeting Tenascin-C. Norihiro Kobayashi, Kenichi Odaka, Tomoya Uehara, Kyoko Imanaka-Yoshida, Yoshinori Kato, Hiroyuki Oyama, Hiroyuki Tadokoro, Hiromichi Akizawa, Shuji Tanada, Michiaki Hiroe, Toshimitsu Fukumura, Issei Komuro, Yasushi Arano, Toshimichi Yoshida, and Toshiaki Irie. Anal. Chem. 2011, 83: 9123-9130. Dec-15-2011 Sofia
Tracking protein aggregation and mislocalization in cells with flow cytometry. Yasmin M Ramdzan, Saskia Polling, Cheryl P Z Chia, Ivan H W Ng, Angelique R Ormsby, Nathan P Croft, Anthony W Purcell, Marie A Bogoyevitch, Dominic C H Ng, Paul A Gleeson & Danny M Hatters. Nature methods 2012 Vol.9 no.5 467-472. May-31-2012 Jerker
Transient Nanoscopic Phase Separation in Biological Lipid Membranes Resolved by Planar Plasmonic Antennas. Pamina M. Winkler, Raju Regmi, Valentin Flauraud, Jrgen Brugger, Herv Rigneault, Jrome Wenger, and Mara F. Garca-Parajo. ACS Nano 2017, 11, 7241-7250. DOI: 10.1021/acsnano.7b03177. Jan-25-2018 Stefan
Triplet Shelving in Fluorescein and Its Derivatives Provides Delayed, Background-Free Fluorescence Detection. Aida A. Demissie and Robert M. Dickson. J. Phys. Chem. A 2020, 124, 7, 1437-1443. https://doi.org/10.1021/acs.jpca.9b11040 Mar-24-2020 Jerker
Tumor cell differentiation by label-free fluorescence microscopy. Petra Weber, Michael Wagner, Petra Kioschis, Waltraud Kessler, and Herbert Schneckenburger. Journal of Biomedical Optics 17(10), 101508 (5 pages October 2012) Jun-21-2012 Lei
Tunable Blinking Kinetics of Cy5 for Precise DNA Quantification and Single-Nucleotide Difference Detection. Hsin-Chih Yeh, Christopher M. Puleo, Yi-Ping Ho, Vasudev J. Bailey, Teck Chuan Lim, Kelvin Liu and Tza-Huei Wang. Biophysical Journal Volume 95 July 2008 729-737. Feb-14-2013 Jerker
Tunable Three-Dimensional Plasmonic Arrays for Large Near-Infrared Fluorescence Enhancement. Jing S. Pang, Ioannis G. Theodorou, Anthony Centeno, Peter K. Petrov, Neil M. Alford, Mary P. Ryan, and Fang Xie. ACS Appl. Mater. Interfaces 2019, 11, 23083-23092. Dec-19-2019 Elin
Two types of luminescence blinking revealed by spectroelectrochemistry of single quantum dots. Christophe Galland, Yagnaseni Ghosh, Andrea Steinbruck, Milan Sykora, Jennifer A. Hollingsworth, Victor I. Klimov & Han Htoon. Nature 10 November 2011 Vol 479: 203-208. Jan-12-2012 Vova
Two-colour live-cell nanoscale imaging of intracellular targets. Francesca Bottanelli, Emil B. Kromann, Edward S. Allgeyer, Roman S. Erdmann, Stephanie Wood Baguley, George Sirinakis, Alanna Schepartz, David Baddeley, Derek K. Toomre, James E. Rothman, & Joerg Bewersdorf. Nature Communications 7:10778, 5 pages, DOI: 10.1038/ncomms10778. Nov-04-2016 Jan
Two-Photon Excitation STED Microscopy in Two Colors in Acute Brain Slices. Philipp Bethge, Ronan Chereau, Elena Avignone, Giovanni Marsicano, and U. Valentin Nagerl. Biophysical Journal Volume 104 February 2013 778-785. Mar-21-2013 Per
Two-photon excitation of the fluorescent nucleobase analogues 2-AP and tC. R. S. K. Lane and S. W. Magennis. RSC Advances, 2012, 2, 11397-11403, DOI: 10.1039/c2ra21881j. Jan-10-2013 Stefan
Two-photon light-sheet nanoscopy by fluorescence fluctuation correlation analysis. Xuanze Chen, Weijian Zong, Rongqin Li, Zhiping Zeng, Jia Zhao, Peng Xi, Liangyi Chen and Yujie Sun. Nanoscale, 2016, 8, 9982-9987. Jun-17-2016 Joachim
Ultra-High Resolution 3D Imaging of Whole Cells. Fang Huang, George Sirinakis, Edward S. Allgeyer, Lena K. Schroeder, Whitney C. Duim, Emil B. Kromann, Thomy Phan, Felix E. Rivera-Molina, Jordan R. Myers, Irnov Irnov, Mark Lessard, Yongdeng Zhang, Mary Ann Handel, Christine Jacobs-Wagner, C. Patrick Lusk, James E. Rothman, Derek Toomre, Martin J. Booth, and Joerg Bewersdorf. Cell 166, 1028-1040, August 11, 2016. Nov-04-2016 Jan
Ultra-photostable DNA FluoroCubes: Mechanism of Photostability and Compatibility with FRET and Dark Quenching. Aaron T. Blanchard, Zi Li, Elizabeth C. Duran, Catherine E. Scull, J. Damon Hoff, Keenan R. Wright, Victor Pan, and Nils G. Walter. Nano Lett. 2022, 22, 6235-6244. Dec-01-2022 Joachim
Ultra-Wideband Multi-Dye-Sensitized Upconverting Nanoparticles for Information Security Application. Jongha Lee, Byeongjun Yoo, Hakyong Lee, Gi Doo Cha, Hee-Su Lee, Youngho Cho, Sang Yeon Kim, Hyunseon Seo, Woongchan Lee, Donghee Son, Myungjoo Kang, Hyung Min Kim, Yong Il Park, Taeghwan Hyeon, and Dae-Hyeong Kim. Adv. Mater 2017, 29, 1603169. Feb-06-2020 Lucía
Ultrabright photoactivatable fluorophores created by reductive caging. Joshua C Vaughan, Shu Jia, & Xiaowei Zhuang. Nature Methods published online 28 October 2012: 7 pages. Nov-08-2012 Lei
Ultrafast photochemistry produces superbright short-wave infrared dots for low-dose in vivo imaging. Harrisson D. A. Santos, Irene Zabala Gutiérrez, Yingli Shen, José Lifante, Erving Ximendes, Marco Laurenti, Diego Méndez-González, Sonia Melle, Oscar G. Calderón, Enrique López Cabarcos, Nuria Fernández, Irene Chaves-Coira, Daniel Lucena-Agell, Luis Monge, Mark D. Mackenzie, José Marqués-Hueso, Callum M. S. Jones Carlos Jacinto, Blanca del Rosal, Ajoy K. Kar, Jorge Rubio-Retama & Daniel Jaque. Nature Communications (2020)11:2933. https://doi.org/10.1038/s41467-020-16333-2. Sep-24-2020 Baris
Ultralong-Range Polaron-Induced Quenching of Excitons in Isolated Conjugated Polymers. Joshua C. Bolinger, et al. Science Vol. 331 2011: 565-8. Dec-08-2011 Stefan
Ultrasensitive Surface Refractive Index Imaging Based on Quasi-Bound States in the Continuum. Silvia Romano, Maria Mangini, Erika Penzo, Stefano Cabrini, Anna Chiara De Luca, Ivo Rendina, Vito Mocella, and Gianluigi Zito. ACS Nano 2020, 14, 15417-15427. Apr-22-2021 Alessandro
Ultraviolet optical horn antennas for label-free detection of single proteins. Aleksandr Barulin, Prithu Roy, Jean-Benoît Claude & Jérôme Wenger. Nature communications (2022) 13:1842 https://doi.org/10.1038/s41467-022-29546-4 . Apr-09-2020 Bariş
Ultraviolet Photostability Improvement for Autofluorescence Correlation Spectroscopy on Label-Free Proteins. Aleksandr Barulin and Jrome Wenger. J. Phys. Chem. Lett. 2020, 11, 2027-2035. https://dx.doi.org/10.1021/acs.jpclett.0c00209 Apr-09-2020 Bariş
Unraveling the hidden temporal range of fast β2-adrenergic receptor mobility by time-resolved fluorescence. Ashwin Balakrishnan, Katherina Hemmen, Susobhan Choudhury, Jan-Hagen Krohn, Kerstin Jansen, Mike Friedrich, Gerti Beliu, Markus Sauer, Martin J. Lohse & Katrin G. Heinze. Communications Biology (2022)5:176 https://doi.org/10.1038/s42003-022-03106-4. Mar-03-2022 Joachim
Upconversion Cross-Correlation Spectroscopy of a Sandwich Immunoassay. Satu Lahtinen, Stefan Krause, Riikka Arppe, Tero Soukka, and Tom Vosch. Chem. Eur.J.2018, 24, 9229-9233. Oct-29-2020 Uliana
Upconversion Nonlinear Structured Illumination Microscopy. Baolei Liu, Chaohao Chen, Xiangjun Di, Jiayan Liao, Shihui Wen, Qian Peter Su, Xuchen Shan, Zai-Quan Xu, Lining Arnold Ju, Chao Mi, Fan Wang, and Dayong Jin. Nano Lett. 2020, 20, 4775-4781, Aug-27-2020 Lucía
Virtual-freezing fluorescence imaging flow cytometry. Hideharu Mikami, Makoto Kawaguchi, Chun-Jung Huang, Hiroki Matsumura, Takeaki Sugimura, Kangrui Huang, Cheng Lei, Shunnosuke Ueno, Taichi Miura, Takuro Ito1, Kazumichi Nagasawa, Takanori Maeno, Hiroshi Watarai, Mai Yamagishi, Sotaro Uemura, Shinsuke Ohnuki, Yoshikazu Ohya, Hiromi Kurokawa, Satoshi Matsusaka, Chia-Wei Sun, Yasuyuki Ozeki & Keisuke Goda. Nature Communications (2020) 11:1162 https://doi.org/10.1038/s41467-020-14929-2 Apr-09-2020 Bariş
Visualization of barriers and obstacles to molecular diffusion in live cells by spatial pair-cross-correlation in two dimensions. Leonel Malacrida, Per Niklas Hedde, Suman Ranjit, Francesco Cardarelli, and Enrico Gratton. Biomedical Optics Express 321 Vol. 9, No. 1, 1 Jan 2018. Aug-30-2018 Stefan
Visualizing RNA dynamics in live cells with bright and stable fluorescent RNAs. Xianjun Chen, Dasheng Zhang, Ni Su, Bingkun Bao, Xin Xie, Fangting Zuo, Lipeng Yang, Hui Wang, Li Jiang, Qiuning Lin, Mengyue Fang, Ningfeng Li, Xin Hua, Zhengda Chen, Chunyan Bao, Jinjin Xu, Wenli Du, Lixin Zhang, Yuzheng Zhao, Linyong Zhu, Joseph Loscalzo and Yi Yan. Nature Biotechnology Vol 37 November 2019, 1287-1293. Nov-21-2019 Brant
Visualizing the native cellular organization by coupling cryofixation with expansion microscopy (Cryo-ExM). Marine H. Laporte, Nikolai Klena, Virginie Hamel and Paul Guichard. Nature Methods vol 19 February 2022 216-222. Mar-03-2022 Joachim
Volumetric two-photon imaging of neurons using stereoscopy (vTwINS). Alexander Song, Adam S Charles, Sue Ann Koay, Jeff L, Gauthier, Stephan Y Thiberge, Jonathan W Pillow & David W Tank. Nature methods, advance online publication doi:10.1038/nmeth.4226. Mar-20-2017 Per
Whole-Cell, 3D, and Multicolor STED Imaging with Exchangeable Fluorophores. Christoph Spahn, Jonathan B. Grimm, Luke D. Lavis, Marko Lampe, and Mike Heilemann. Nano Lett. 2019, 19, 500-505. DOI: 10.1021/acs.nanolett.8b04385 Apr-11-2019 Chinmaya

Next person responsible for selecting interesting recent papers to be mentioned at the group meeting is (see also):

  1. Niusha
  2. Haichun
  3. Per
  4. Bariş
  5. Hanie
  6. Chinmaya
  7. Joachim
  8. Abhilash
  9. Jerker
UP www.biomolphysics.kth.se - per_at_biomolphysics_dot_kth_dot_se - January 26 2023 KTH